mpaqt
Multi-Platform Analysis and Quantification of Transcripts
| Attributes |
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| Version: |
0.3.1 |
Usage
mpaqt COMMAND
Environment Variables
*MPAQT_DIR*
Working directory for the project
| Attributes |
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| Required: |
✓ Yes |
Commands
- index - Create the MPAQT index for the reference transcriptome and its annotation
- create - Create commands for project or matrices
- prepare - Prepare commands for short-read and long-read RNA-seq data
- quant - Quantify the expression of transcripts using short-read and long-read RNA-seq data
mpaqt index
Create the MPAQT index for the reference transcriptome and its annotation